Spa_g18697


Description : not classified & original description: none


Gene families : OG0006152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18697

Target Alias Description ECC score Gene Family Method Actions
AT1G12250 No alias Pentapeptide repeat-containing protein 0.07 OrthoFinder output from all 47 species
Adi_g015162 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Als_g02920 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g58664 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.20G040100.1 Ceric.20G040100 not classified & original description: pacid=50565962... 0.04 OrthoFinder output from all 47 species
Dac_g13925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06102 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g11753 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.07 OrthoFinder output from all 47 species
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os02g42960.1 LOC_Os02g42960 Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g28816 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
MA_8855586g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g12430.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Msp_g07925 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g05641 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18142 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pp3c21_17930V3.1 Pp3c21_17930 Pentapeptide repeat-containing protein 0.02 OrthoFinder output from all 47 species
Ppi_g16845 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001784 No alias not classified & original description: CDS=1-996 0.05 OrthoFinder output from all 47 species
Sam_g15961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g079110.4.1 Solyc08g079110 Thylakoid lumenal protein TL20.3, chloroplastic... 0.02 OrthoFinder output from all 47 species
Tin_g10553 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 174 209
IPR001646 5peptide_repeat 107 146
No external refs found!