Spa_g18575 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18575

Target Alias Description ECC score Gene Family Method Actions
Adi_g002453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056937 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05826 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04431 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07466 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18203 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18223 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18745 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18763 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30870 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33935 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54731 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55255 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55292 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55301 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55307 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03222 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05068 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07603 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0084.g038899 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2004 0.04 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.02 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.03 OrthoFinder output from all 47 species
Azfi_s0254.g060453 No alias not classified & original description: CDS=1-2166 0.04 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.02 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.02 OrthoFinder output from all 47 species
Azfi_s1399.g102576 No alias not classified & original description: CDS=1-1533 0.04 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.02 OrthoFinder output from all 47 species
Cba_g04732 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05221 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05975 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07653 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07705 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07768 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19528 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19873 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g19892 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20888 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23174 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g66799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67869 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75387 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G002900.1 Ceric.09G002900 not classified & original description: pacid=50586532... 0.03 OrthoFinder output from all 47 species
Ceric.11G090500.1 Ceric.11G090500 not classified & original description: pacid=50596019... 0.03 OrthoFinder output from all 47 species
Ceric.20G054700.1 Ceric.20G054700 not classified & original description: pacid=50567573... 0.04 OrthoFinder output from all 47 species
Ceric.31G051800.1 Ceric.31G051800 not classified & original description: pacid=50574746... 0.03 OrthoFinder output from all 47 species
Ceric.34G015500.1 OTP84, Ceric.34G015500 not classified & original description: pacid=50623596... 0.03 OrthoFinder output from all 47 species
Ceric.36G034200.1 Ceric.36G034200 not classified & original description: pacid=50568019... 0.03 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.02 OrthoFinder output from all 47 species
Dac_g13392 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17227 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18170 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g01384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58364 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03441 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04211 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05005 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05014 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13947 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g48582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07764 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23334 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15348 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g43649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02334 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005758 No alias not classified & original description: CDS=1-2499 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018767 No alias not classified & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Sam_g24539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39858 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06738 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56098 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04732 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09941 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13334 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17462 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29152 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g34089 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 494 521
IPR002885 Pentatricopeptide_repeat 379 407
IPR002885 Pentatricopeptide_repeat 235 257
IPR002885 Pentatricopeptide_repeat 631 657
IPR002885 Pentatricopeptide_repeat 466 488
IPR002885 Pentatricopeptide_repeat 260 307
IPR002885 Pentatricopeptide_repeat 160 207
No external refs found!