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  5. Spa_g18331

Spa_g18331


Description : not classified & original description: none


Gene families : OG0000221 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18331
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00251380 evm_27.TU.AmTr_v1... Protein BPS1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00052950 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G01550 BPS1 Protein of unknown function (DUF793) 0.04 OrthoFinder output from all 47 species
AT1G18740 No alias Protein of unknown function (DUF793) 0.05 OrthoFinder output from all 47 species
AT1G74450 No alias Protein of unknown function (DUF793) 0.04 OrthoFinder output from all 47 species
AT4G11300 No alias Protein of unknown function (DUF793) 0.02 OrthoFinder output from all 47 species
Adi_g009056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g009779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g084369 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g108622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03912 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01817 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g09153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g10598 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01778 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Als_g04972 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g50790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54448 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01622 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17662 BPS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene17514.t1 Aspi01Gene17514 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58350.t1 Aspi01Gene58350 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68473.t1 Aspi01Gene68473 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G039400.1 Ceric.04G039400 not classified & original description: pacid=50630851... 0.04 OrthoFinder output from all 47 species
Ceric.22G029200.1 Ceric.22G029200 not classified & original description: pacid=50614228... 0.09 OrthoFinder output from all 47 species
Ceric.22G029500.1 Ceric.22G029500 not classified & original description: pacid=50614434... 0.06 OrthoFinder output from all 47 species
Ceric.22G030100.1 BPS1, Ceric.22G030100 not classified & original description: pacid=50615453... 0.06 OrthoFinder output from all 47 species
Ceric.22G031900.1 BPS1, Ceric.22G031900 not classified & original description: pacid=50615144... 0.06 OrthoFinder output from all 47 species
Ceric.22G032000.1 Ceric.22G032000 not classified & original description: pacid=50615093... 0.06 OrthoFinder output from all 47 species
Ceric.22G032100.1 Ceric.22G032100 not classified & original description: pacid=50614987... 0.05 OrthoFinder output from all 47 species
Ceric.22G032200.1 BPS1, Ceric.22G032200 not classified & original description: pacid=50614808... 0.06 OrthoFinder output from all 47 species
Ceric.22G032300.1 Ceric.22G032300 not classified & original description: pacid=50615347... 0.03 OrthoFinder output from all 47 species
Ceric.25G006400.1 BPS1, Ceric.25G006400 not classified & original description: pacid=50594262... 0.05 OrthoFinder output from all 47 species
Ceric.25G006500.1 Ceric.25G006500 not classified & original description: pacid=50594057... 0.09 OrthoFinder output from all 47 species
Ceric.27G016500.1 Ceric.27G016500 not classified & original description: pacid=50605586... 0.05 OrthoFinder output from all 47 species
Ceric.35G009900.1 Ceric.35G009900 not classified & original description: pacid=50581013... 0.06 OrthoFinder output from all 47 species
Dcu_g02755 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16221 BPS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g22435 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05881 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g23107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_06674 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_22841 No alias Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os11g06440.1 LOC_Os11g06440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g16261 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_130577g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35676 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g48226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01034 BPS1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g01945 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g06670 ROH1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g30449 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g09452 BPS1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g12102 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Pir_g23868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07400 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10143 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo422297 No alias No description available 0.04 OrthoFinder output from all 47 species
Solyc01g094950.3.1 Solyc01g094950 Protein BPS1, chloroplastic OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc04g071480.1.1 Solyc04g071480 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g12074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25384 BPS1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03876 BPS1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004370_P001 Zm00001e004370 UPF0496 protein 4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e024656_P001 Zm00001e024656 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR008511 ROH1-like 71 429
No external refs found!