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  5. Spa_g18287

Spa_g18287


Description : component *(PWR) of HDA9-PWR deacetylation complex & original description: none


Gene families : OG0001343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001343_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18287
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00108p00114900 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
AT3G52250 No alias Duplicated homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g04199 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Aev_g14134 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ala_g11479 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.09 OrthoFinder output from all 47 species
Ala_g19843 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.1 OrthoFinder output from all 47 species
Als_g52187 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Aob_g27923 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0108.g045225 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Cba_g09126 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g34766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71610 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ceric.14G077400.1 Ceric.14G077400 component *(PWR) of HDA9-PWR deacetylation complex &... 0.06 OrthoFinder output from all 47 species
Ceric.15G065000.1 Ceric.15G065000 component *(PWR) of HDA9-PWR deacetylation complex &... 0.06 OrthoFinder output from all 47 species
Ceric.19G063100.1 Ceric.19G063100 not classified & original description: pacid=50576680... 0.03 OrthoFinder output from all 47 species
Dac_g20247 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Dac_g39968 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g41822 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Dde_g04466 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g17925 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01016309001 No alias Chromatin organisation.histone modifications.histone... 0.09 OrthoFinder output from all 47 species
LOC_Os05g03550.1 LOC_Os05g03550 component PWR of HDA9-PWR deacetylation complex 0.04 OrthoFinder output from all 47 species
Len_g59754 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g06278 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Lfl_g09069 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.06 OrthoFinder output from all 47 species
Lfl_g13026 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
MA_104862g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.03 OrthoFinder output from all 47 species
MA_12404g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_14319g0010 No alias component PWR of HDA9-PWR deacetylation complex 0.03 OrthoFinder output from all 47 species
Msp_g19128 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Msp_g39523 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ore_g41298 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.02 OrthoFinder output from all 47 species
Pir_g13639 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Pnu_g13090 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g13727 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.03 OrthoFinder output from all 47 species
Sam_g08924 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.04 OrthoFinder output from all 47 species
Smo78396 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Smo79245 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Spa_g15715 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Tin_g24813 No alias component *(PWR) of HDA9-PWR deacetylation complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e027573_P003 Zm00001e027573 component PWR of HDA9-PWR deacetylation complex 0.05 OrthoFinder output from all 47 species
Zm00001e029482_P006 Zm00001e029482 component PWR of HDA9-PWR deacetylation complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 883 924
IPR001005 SANT/Myb 1324 1365
IPR001005 SANT/Myb 1044 1085
No external refs found!