Spa_g18181 (PRH75)

Aliases : PRH75

Description : not classified & original description: none

Gene families : OG0000466 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000466_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g18181

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00092p00127820	PMH2, ATRH53,...	RNA processing.organelle machineries.RNA...	0.04	OrthoFinder output from all 47 species
Ala_g14243	PRH75	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14234	PRH75	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g09620	PRH75	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g08480	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.03	OrthoFinder output from all 47 species
Aop_g18513	PRH75	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Cba_g36237	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.02	OrthoFinder output from all 47 species
Ceric.06G054800.1	emb1138, Ceric.06G054800	not classified & original description: pacid=50619432...	0.03	OrthoFinder output from all 47 species
Dcu_g10256	PRH75	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g09784	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.05	OrthoFinder output from all 47 species
Ehy_g02845	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g07831	PRH75	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os12g41715.1	PMH2, ATRH53,...	RNA helicase (PMH)	0.03	OrthoFinder output from all 47 species
Lfl_g06681	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g38604	PRH75	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_17924g0010	PRH75	DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Mp2g07080.1	PRH75	DEAD-box ATP-dependent RNA helicase 7 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Nbi_g03129	PRH75	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g07399	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.02	OrthoFinder output from all 47 species
Ore_g38810	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g16512	PRH75	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g34523	PRH75	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g13634	No alias	group-II intron splicing RNA helicase *(RH3) & original...	0.02	OrthoFinder output from all 47 species
Solyc07g044760.3.1	PMH2, ATRH53,...	RNA helicase (PMH)	0.02	OrthoFinder output from all 47 species
Solyc12g006320.3.1	PMH2, ATRH53,...	RNA helicase (PMH)	0.02	OrthoFinder output from all 47 species
Spa_g08414	emb1138	group-II intron splicing RNA helicase *(RH3) & original...	0.03	OrthoFinder output from all 47 species
Tin_g15128	PRH75	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e003219_P001	PMH2, ATRH53,...	RNA helicase (PMH)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016779	nucleotidyltransferase activity	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	152	329
IPR012562	GUCT	564	658
IPR001650	Helicase_C	372	474

External Links

No external refs found!

Spa_g18181 (PRH75)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation