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  5. Spa_g18002

Spa_g18002 (COI1)


Aliases : COI1

Description : component *(COI) of jasmonic acid receptor complex & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00126140 AFB2,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT1G12820 AFB3 auxin signaling F-box 3 0.03 OrthoFinder output from all 47 species
AT5G49980 AFB5 auxin F-box protein 5 0.03 OrthoFinder output from all 47 species
Adi_g112625 AFB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05126 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Ala_g11817 COI1 component *(COI) of jasmonic acid receptor complex &... 0.07 OrthoFinder output from all 47 species
Aop_g13268 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.06 OrthoFinder output from all 47 species
Ceric.1Z143900.1 COI1, Ceric.1Z143900 not classified & original description: pacid=50567868... 0.08 OrthoFinder output from all 47 species
Ceric.1Z144000.1 COI1, Ceric.1Z144000 component *(COI) of jasmonic acid receptor complex &... 0.08 OrthoFinder output from all 47 species
Dde_g10385 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Ehy_g04939 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01016368001 COI1 Phytohormones.jasmonic acid.perception and signal... 0.03 OrthoFinder output from all 47 species
LOC_Os04g32460.1 AFB2, LOC_Os04g32460 component TIR1/AFB of auxin receptor complex. component... 0.05 OrthoFinder output from all 47 species
Len_g24015 COI1 component *(COI) of jasmonic acid receptor complex &... 0.05 OrthoFinder output from all 47 species
MA_15842g0010 TIR1 component TIR1/AFB of auxin receptor complex. component... 0.04 OrthoFinder output from all 47 species
MA_47869g0020 No alias F-box protein FBX14 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g02465 COI1 component *(COI) of jasmonic acid receptor complex &... 0.04 OrthoFinder output from all 47 species
Nbi_g01449 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.05 OrthoFinder output from all 47 species
Nbi_g08346 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.06 OrthoFinder output from all 47 species
Nbi_g10590 COI1 component *(COI) of jasmonic acid receptor complex &... 0.06 OrthoFinder output from all 47 species
Ore_g26263 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.08 OrthoFinder output from all 47 species
Pir_g01684 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.05 OrthoFinder output from all 47 species
Pir_g07658 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Sam_g05124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24051 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Sam_g27933 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Sam_g44971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26581 COI1 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041567 COI1_F-box 12 49
IPR041101 Transp_inhibit 70 115
No external refs found!