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  5. Spa_g17990

Spa_g17990 (GRF2, AtGRF2)


Aliases : GRF2, AtGRF2

Description : component *(GRF) of GRF-GIF transcriptional complex & original description: none


Gene families : OG0000528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17990
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT2G06200 GRF6, AtGRF6 growth-regulating factor 6 0.03 OrthoFinder output from all 47 species
AT2G22840 GRF1, AtGRF1 growth-regulating factor 1 0.02 OrthoFinder output from all 47 species
AT2G36400 GRF3, AtGRF3 growth-regulating factor 3 0.02 OrthoFinder output from all 47 species
AT3G52910 GRF4, AtGRF4 growth-regulating factor 4 0.03 OrthoFinder output from all 47 species
Adi_g014148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26167 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Als_g10136 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Als_g13520 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Als_g51481 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22371.t1 GRF5, AtGRF5,... component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Cba_g12857 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Ceric.15G044200.1 GRF3, AtGRF3,... component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Ceric.19G047800.1 GRF2, AtGRF2,... component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Ceric.37G026200.1 GRF2, AtGRF2,... not classified & original description: pacid=50616854... 0.03 OrthoFinder output from all 47 species
Ehy_g12992 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01009299001 GRF1, AtGRF1 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.02 OrthoFinder output from all 47 species
Lfl_g18164 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
MA_137877g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
MA_33661g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
MA_88101g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Ore_g20696 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g06956 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002301 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023900 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Tin_g11764 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Tin_g32090 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e023769_P003 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Zm00001e030774_P001 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR014977 WRC_dom 309 349
No external refs found!