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  5. Spa_g17890

Spa_g17890


Description : not classified & original description: none


Gene families : OG0001138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17890
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AT1G27000 No alias Protein of unknown function (DUF1664) 0.04 OrthoFinder output from all 47 species
Aspi01Gene48739.t1 Aspi01Gene48739 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0672.g081789 No alias not classified & original description: CDS=69-1019 0.02 OrthoFinder output from all 47 species
Dac_g07576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g07967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g015820.4.1 Solyc05g015820 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g04455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004424 imidazoleglycerol-phosphate dehydratase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR012458 DUF1664 162 283
No external refs found!