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  5. Spa_g17860

Spa_g17860


Description : subunit gamma of cargo adaptor F-subcomplex & original description: none


Gene families : OG0001172 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17860
Cluster HCCA: Cluster_351

Target Alias Description ECC score Gene Family Method Actions
Adi_g106385 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Aev_g14556 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species
Aev_g44391 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Aop_g06505 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species
Cba_g22384 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 39 species
Ceric.04G110200.1 Ceric.04G110200 subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Dcu_g01867 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species
Dde_g05374 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 39 species
Gb_36850 No alias subunit gamma of cargo adaptor F-subcomplex 0.07 OrthoFinder output from all 39 species
Gb_36851 No alias Coatomer subunit gamma-2 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 39 species
Lfl_g02207 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 39 species
Mp1g05250.1 No alias subunit gamma of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 39 species
Msp_g24101 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.06 OrthoFinder output from all 39 species
Nbi_g10516 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.13 OrthoFinder output from all 39 species
Ore_g06577 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Pir_g10430 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 39 species
Ppi_g01355 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 39 species
Sam_g09045 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 39 species
Tin_g11774 No alias subunit gamma of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR032154 Coatomer_g_Cpla 779 893
IPR013040 Coatomer_gsu_app_Ig-like_dom 633 776
IPR002553 Clathrin/coatomer_adapt-like_N 31 543
No external refs found!