AMTR_s00097p00060630 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00097.13

Description : Secondary metabolism.terpenoids.terpenoid synthesis.carotenoid metabolism.LCY-b lycopene beta cyclase


Gene families : OG_01_0004729 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004729_tree ,
OG_02_0005056 (LandPlants) Phylogenetic Tree(s): OG_02_0005056_tree ,
OG_03_0006980 (SeedPlants) Phylogenetic Tree(s): OG_03_0006980_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00097p00060630
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cre08.g358538 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
MA_10428881g0010 No alias lycopene beta cyclase (LCY-b) 0.02 Archaeplastida
Pp3c4_1180V3.1 No alias lycopene cyclase 0.03 Archaeplastida
Pp3c4_1180V3.1 No alias lycopene cyclase 0.03 LandPlants
Zm00001e013933_P001 No alias lycopene beta cyclase (LCY-b) 0.02 LandPlants
Solyc10g079480.1.1 No alias lycopene beta cyclase (LCY-b) 0.01 SeedPlants
Zm00001e013933_P001 No alias lycopene beta cyclase (LCY-b) 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0016117 carotenoid biosynthetic process IEA Interproscan
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!