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  5. Spa_g17853

Spa_g17853


Description : not classified & original description: none


Gene families : OG0000995 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17853

Target Alias Description ECC score Gene Family Method Actions
AT3G62050 No alias Putative endonuclease or glycosyl hydrolase 0.02 OrthoFinder output from all 47 species
Adi_g056552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20512.t1 Aspi01Gene20512 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13172 EDA32 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10988 EDA32 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016939 No alias not classified & original description: CDS=1-1200 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR021139 NYN_MARF1 10 147
IPR025605 OST-HTH/LOTUS_dom 650 699
No external refs found!