1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g17843

Spa_g17843 (RPS15A)


Aliases : RPS15A

Description : component *(uS8) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001724_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17843

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00192110 RPS15A,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.15 OrthoFinder output from all 47 species
AT1G07770 RPS15A ribosomal protein S15A 0.21 OrthoFinder output from all 47 species
AT3G46040 RPS15AD ribosomal protein S15A D 0.17 OrthoFinder output from all 47 species
AT5G59850 No alias Ribosomal protein S8 family protein 0.29 OrthoFinder output from all 47 species
Adi_g053042 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Adi_g124065 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ala_g11423 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Ala_g32909 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.1 OrthoFinder output from all 47 species
Als_g06762 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Als_g25183 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Aob_g00427 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Aop_g23610 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.3 OrthoFinder output from all 47 species
Aspi01Gene41551.t1 RPS15A, Aspi01Gene41551 component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene64037.t1 RPS15A, Aspi01Gene64037 component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025499 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.12 OrthoFinder output from all 47 species
Azfi_s0073.g037095 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.16 OrthoFinder output from all 47 species
Azfi_s0078.g038157 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.13 OrthoFinder output from all 47 species
Azfi_s0801.g087534 No alias component *(uS8) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cba_g09314 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Ceric.10G044000.1 RPS15A, Ceric.10G044000 component *(uS8) of small ribosomal-subunit (SSU)... 0.19 OrthoFinder output from all 47 species
Ceric.20G029200.1 RPS15A, Ceric.20G029200 component *(uS8) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000158.110 RPS15A Protein biosynthesis.cytosolic ribosome.small subunit... 0.21 OrthoFinder output from all 47 species
Cre05.g234637 RPS15A Protein biosynthesis.cytosolic ribosome.small subunit... 0.25 OrthoFinder output from all 47 species
Dac_g01189 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dac_g06585 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.21 OrthoFinder output from all 47 species
Dcu_g35754 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dde_g00146 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
GSVIVT01016595001 RPS15A Protein biosynthesis.cytosolic ribosome.small subunit... 0.19 OrthoFinder output from all 47 species
GSVIVT01025622001 RPS15A Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 OrthoFinder output from all 47 species
Gb_08537 RPS15A component RPS15a of SSU proteome 0.12 OrthoFinder output from all 47 species
Gb_37191 RPS15A component RPS15a of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os02g27760.1 RPS15A, LOC_Os02g27760 component RPS15a of SSU proteome 0.2 OrthoFinder output from all 47 species
LOC_Os07g10720.1 RPS15A, LOC_Os07g10720 component RPS15a of SSU proteome 0.3 OrthoFinder output from all 47 species
Len_g20800 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Len_g25520 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g10074 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g26956 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
MA_10427318g0020 RPS15AD component RPS15a of SSU proteome 0.11 OrthoFinder output from all 47 species
MA_57835g0010 RPS15AD component RPS15a of SSU proteome 0.11 OrthoFinder output from all 47 species
MA_82191g0010 RPS15AD component RPS15a of SSU proteome 0.08 OrthoFinder output from all 47 species
Mp8g06510.1 RPS15A component RPS15a of SSU proteome 0.27 OrthoFinder output from all 47 species
Mp8g13010.1 RPS15A component RPS15a of SSU proteome 0.23 OrthoFinder output from all 47 species
Msp_g41302 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.12 OrthoFinder output from all 47 species
Nbi_g05066 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Pir_g01095 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Pp3c1_4290V3.1 RPS15A, Pp3c1_4290 Ribosomal protein S8 family protein 0.18 OrthoFinder output from all 47 species
Pp3c2_32050V3.1 RPS15A, Pp3c2_32050 Ribosomal protein S8 family protein 0.14 OrthoFinder output from all 47 species
Pp3c3_1140V3.1 RPS15A, Pp3c3_1140 ribosomal protein S15A 0.08 OrthoFinder output from all 47 species
Pp3c4_27540V3.1 RPS15A, Pp3c4_27540 Ribosomal protein S8 family protein 0.15 OrthoFinder output from all 47 species
Ppi_g61636 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022035 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g00243 No alias component *(uS8) of small ribosomal-subunit (SSU)... 0.12 OrthoFinder output from all 47 species
Sam_g09164 No alias component *(uS8) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g09165 No alias component *(uS8) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Smo228163 RPS15A Protein biosynthesis.cytosolic ribosome.small subunit... 0.12 OrthoFinder output from all 47 species
Solyc04g150158.1.1 RPS15A, Solyc04g150158 component RPS15a of SSU proteome 0.29 OrthoFinder output from all 47 species
Spa_g35400 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Tin_g22932 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.09 OrthoFinder output from all 47 species
Zm00001e016394_P001 RPS15A, Zm00001e016394 component RPS15a of SSU proteome 0.24 OrthoFinder output from all 47 species
Zm00001e026115_P001 RPS15A, Zm00001e026115 component RPS15a of SSU proteome 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 42 165
No external refs found!