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  5. Spa_g17806

Spa_g17806 (AGL10, CAL1, CAL)


Aliases : AGL10, CAL1, CAL

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17806

Target Alias Description ECC score Gene Family Method Actions
Adi_g020010 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g072612 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20861 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g14234 AGL3, SEP4 MADS/AGL-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0038.g026344 AGL21 not classified & original description: CDS=1-522 0.05 OrthoFinder output from all 47 species
Dac_g20775 AGL16 MADS/AGL-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g19022 AGL13 MADS/AGL-type transcription factor & original description: none 0.11 OrthoFinder output from all 47 species
MA_6279308g0010 SOC1, AGL20, ATSOC1 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Solyc04g005320.3.1 AGL2, SEP1,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Solyc12g038510.2.1 AGL4, SEP2,... transcription factor (MADS/AGL) 0.05 OrthoFinder output from all 47 species
Zm00001e003667_P001 AGL9, SEP3,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Zm00001e016529_P004 SHP2, AGL5,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Zm00001e030373_P001 AGL10, CAL1,... transcription factor (MADS/AGL) 0.01 OrthoFinder output from all 47 species
Zm00001e031267_P003 SHP2, AGL5,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR002487 TF_Kbox 105 188
IPR002100 TF_MADSbox 25 72
No external refs found!