1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g17522

Spa_g17522


Description : not classified & original description: none


Gene families : OG0000692 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000692_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17522
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AT2G17150 No alias Plant regulator RWP-RK family protein 0.03 OrthoFinder output from all 47 species
Ceric.31G026100.1 Ceric.31G026100 transcription factor *(NIN) & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021168.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre03.g177700 No alias RNA biosynthesis.transcriptional activation.NIN-like... 0.02 OrthoFinder output from all 47 species
Dac_g37925 No alias transcription factor *(NIN) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013370001 No alias External stimuli response.biotic... 0.04 OrthoFinder output from all 47 species
Len_g12958 NLP7 transcription factor *(NIN) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29425 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51670 No alias transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g008410.3.1 NLP7, Solyc08g008410 transcription factor (NLP). NLP6/7 nitrate response... 0.03 OrthoFinder output from all 47 species
Spa_g48233 NLP7 transcription factor *(NIN) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013603_P001 Zm00001e013603 transcription factor (NLP) 0.03 OrthoFinder output from all 47 species
Zm00001e016364_P001 NLP7, Zm00001e016364 transcription factor (NLP). NLP6/7 nitrate response... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 230 286
No external refs found!