Zm00001d042738 (GRMZM2G135713)


Aliases : GRMZM2G135713

Description : 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a cytoplasmically localized U-box domain containing E3 ubiquitin ligase that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity. plant U-box 23 (PUB23)


Gene families : OG_01_0000079 (Gene family) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d042738
Cluster HCCA cluster: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT3G11840 PUB24 plant U-box 24 0.03 Gene family
AT3G52450 PUB22 plant U-box 22 0.02 Gene family
LOC_Os01g64570 Os01g0865700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.06 Gene family
LOC_Os02g33590 Os02g0539200 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.04 Gene family
LOC_Os02g33680 Os02g0540700 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.05 Gene family
LOC_Os02g34410 Os02g0548700 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family
LOC_Os04g34140 Os04g0418500 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
LOC_Os04g58920 Os04g0686000 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
MA_10432981g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
MA_84154g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.02 Gene family
MA_8837995g0010 No alias 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.02 Gene family
Solyc01g007010.3.1 Solyc01g007010.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc01g007040.3.1 Solyc01g007040.3 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.02 Gene family
Solyc01g107980.3.1 Solyc01g107980.3 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.02 Gene family
Solyc06g074140.1.1 Solyc06g074140.1 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Solyc11g005700.1.1 Solyc11g005700.1 27.3.64 RNA.regulation of transcription.PHOR1 "CYS, MET,... 0.03 Gene family
Zm00001d023480 GRMZM2G031624 35.1 not assigned.no ontology TTF-type zinc finger... 0.02 Gene family
Zm00001d026040 GRMZM2G169690 27.3.64 RNA.regulation of transcription.PHOR1 Encodes a... 0.03 Gene family
Zm00001d050712 GRMZM5G811633 27.3.64 RNA.regulation of transcription.PHOR1 plant... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 8 82
No external refs found!