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  5. Spa_g17474

Spa_g17474


Description : not classified & original description: none


Gene families : OG0000540 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000540_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17474
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00151900 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00030p00143350 MKS1,... No description available 0.03 OrthoFinder output from all 47 species
AT1G21326 No alias VQ motif-containing protein 0.02 OrthoFinder output from all 47 species
AT1G68450 No alias VQ motif-containing protein 0.05 OrthoFinder output from all 47 species
AT3G18690 MKS1 MAP kinase substrate 1 0.05 OrthoFinder output from all 47 species
Adi_g081270 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g081271 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g128825 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11909 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g22625 MKS1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23289 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g39767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene28143.t1 Aspi01Gene28143 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36396.t1 Aspi01Gene36396 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36397.t1 Aspi01Gene36397 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene36398.t1 Aspi01Gene36398 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g09624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29938 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.29G042800.1 Ceric.29G042800 not classified & original description: pacid=50624678... 0.03 OrthoFinder output from all 47 species
Dac_g01989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g14208 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g43064 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31553 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g26828 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_01317 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_04497 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_22052 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_37589 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g33600.1 MKS1, LOC_Os02g33600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g01260.1 MKS1, LOC_Os08g01260 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g57301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_27183g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_3573g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_6029g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_63411g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_87081g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp5g23540.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g19743 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g35799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35800 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07983 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g07005 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g61464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003706 No alias not classified & original description: CDS=1-714 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004079 No alias not classified & original description: CDS=1-978 0.04 OrthoFinder output from all 47 species
Solyc11g005720.1.1 MKS1, Solyc11g005720 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Tin_g22069 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e037399_P001 MKS1, Zm00001e037399 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 46 72
No external refs found!