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  5. Spa_g17334

Spa_g17334


Description : not classified & original description: none


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17334
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00241930 BCS1,... Protein HYPER-SENSITIVITY-RELATED 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aop_g36939 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0349.g066532 No alias not classified & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Cba_g35449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G064600.1 Ceric.07G064600 not classified & original description: pacid=50626260... 0.05 OrthoFinder output from all 47 species
Dcu_g44256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g01247 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01032554001 AATP1 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g45450.1 LOC_Os01g45450 AAA-ATPase At5g17740 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g055810.1.1 Solyc12g055810 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 26 118
IPR003959 ATPase_AAA_core 245 386
No external refs found!