Spa_g17293


Description : not classified & original description: none


Gene families : OG0001661 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001661_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17293
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT3G26910 No alias hydroxyproline-rich glycoprotein family protein 0.02 OrthoFinder output from all 47 species
AT5G41100 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Ala_g08490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0073.g037225 No alias not classified & original description: CDS=67-1785 0.03 OrthoFinder output from all 47 species
Cba_g52723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G081000.1 Ceric.01G081000 not classified & original description: pacid=50592442... 0.03 OrthoFinder output from all 47 species
Dcu_g48955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033030001 No alias Uncharacterized protein At2g33490 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Lfl_g03197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_933144g0010 No alias Uncharacterized protein At2g33490 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp1g15070.1 No alias Uncharacterized protein At2g33490 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g02301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo443693 No alias Uncharacterized protein At2g33490 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g009820.4.1 Solyc01g009820 Uncharacterized protein At2g33490 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc02g094410.4.1 Solyc02g094410 Uncharacterized protein At2g33490 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e014639_P001 Zm00001e014639 Uncharacterized protein At2g33490 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e040773_P001 Zm00001e040773 Uncharacterized protein At2g33490 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!