1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g17209

Spa_g17209


Description : not classified & original description: none


Gene families : OG0005855 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005855_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17209

Target Alias Description ECC score Gene Family Method Actions
Adi_g059728 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g12880.2 LOC_Os02g12880 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g04687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17740 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g16247 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005158 No alias not classified & original description: CDS=96-1199 0.03 OrthoFinder output from all 47 species
Zm00001e014460_P003 Zm00001e014460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 303 366
No external refs found!