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  5. Spa_g17042

Spa_g17042


Description : not classified & original description: none


Gene families : OG0000414 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000414_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17042

Target Alias Description ECC score Gene Family Method Actions
Ala_g20501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68067 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g20434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37263 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g13893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07380 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17360 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g54578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g59799 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g14149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14569 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g44765 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g44947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30371 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g32741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 289 333
IPR002885 Pentatricopeptide_repeat 363 389
IPR002885 Pentatricopeptide_repeat 261 281
No external refs found!