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  5. Spa_g16853

Spa_g16853


Description : not classified & original description: none


Gene families : OG0006136 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006136_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16853

Target Alias Description ECC score Gene Family Method Actions
Adi_g015300 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g11250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04503 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08831 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene06837.t1 Aspi01Gene06837 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0030.g024404 No alias not classified & original description: CDS=1-1935 0.05 OrthoFinder output from all 47 species
Cba_g01240 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G079000.1 Ceric.01G079000 not classified & original description: pacid=50590763... 0.04 OrthoFinder output from all 47 species
Ceric.10G065900.1 Ceric.10G065900 not classified & original description: pacid=50613278... 0.03 OrthoFinder output from all 47 species
Dcu_g15187 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g09366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09687 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g02287 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10946 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 496 521
IPR002885 Pentatricopeptide_repeat 459 482
IPR002885 Pentatricopeptide_repeat 597 627
IPR002885 Pentatricopeptide_repeat 191 210
IPR002885 Pentatricopeptide_repeat 528 551
IPR002885 Pentatricopeptide_repeat 217 266
IPR002885 Pentatricopeptide_repeat 660 693
No external refs found!