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  5. Spa_g16684

Spa_g16684 (LIL3:1)


Aliases : LIL3:1

Description : LHCII-stabilizing factor *(SEP3) & original description: none


Gene families : OG0002922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16684
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT4G17600 LIL3:1 Chlorophyll A-B binding family protein 0.04 OrthoFinder output from all 47 species
Adi_g020993 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38602 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g32557 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64163.t1 LIL3:1, Aspi01Gene64163 LHCII-stabilizing factor *(SEP3) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001642 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.21G022000.1 LIL3:1, Ceric.21G022000 LHCII-stabilizing factor *(SEP3) & original description:... 0.02 OrthoFinder output from all 47 species
Cre03.g199535 LIL3:1 Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
GSVIVT01003693001 LIL3:1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Gb_05189 LIL3:1 SEP3 LHC-related protein 0.07 OrthoFinder output from all 47 species
LOC_Os02g03330.1 LIL3:1, LOC_Os02g03330 SEP3 LHC-related protein 0.04 OrthoFinder output from all 47 species
Mp1g17030.1 LIL3:1 SEP3 LHC-related protein 0.09 OrthoFinder output from all 47 species
Msp_g25517 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08279 LIL3:1 LHCII-stabilizing factor *(SEP3) & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c2_19700V3.1 LIL3:1, Pp3c2_19700 Chlorophyll A-B binding family protein 0.03 OrthoFinder output from all 47 species
Smo106498 LIL3:1 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Solyc03g094000.3.1 LIL3:1, Solyc03g094000 SEP3 LHC-related protein 0.02 OrthoFinder output from all 47 species
Solyc08g077880.3.1 LIL3:1, Solyc08g077880 SEP3 LHC-related protein 0.03 OrthoFinder output from all 47 species
Zm00001e013528_P001 LIL3:1, Zm00001e013528 SEP3 LHC-related protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!