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  5. Spa_g16569

Spa_g16569 (CRF3)


Aliases : CRF3

Description : subgroup ERF-VI transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16569

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00148p00084540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 OrthoFinder output from all 47 species
AT1G43160 RAP2.6 related to AP2 6 0.04 OrthoFinder output from all 47 species
AT1G53910 RAP2.12 related to AP2 12 0.04 OrthoFinder output from all 47 species
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.03 OrthoFinder output from all 47 species
AT2G44940 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G27950 CRF4 cytokinin response factor 4 0.03 OrthoFinder output from all 47 species
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G34410 RRTF1 redox responsive transcription factor 1 0.03 OrthoFinder output from all 47 species
Adi_g018599 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g039127 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g111958 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g04879 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06485 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g09217 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17161 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Aev_g18013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19208 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aev_g19822 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g24731 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g46572 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49009 ORA47 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10286 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g14120 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g26687 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54778 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62202 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g01030 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g01204 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10334 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g12983 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g38999 ORA47 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22167.t1 TMO3, CRF2,... subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24409.t1 DEAR2, Aspi01Gene24409 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene47265.t1 TINY2, Aspi01Gene47265 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56619.t1 RAP2.1, Aspi01Gene56619 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57065.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene69424.t1 Aspi01Gene69424 subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11545 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Cba_g13420 CRF4 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g60426 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.04G096400.1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z027000.1 ERF110, Ceric.1Z027000 not classified & original description: pacid=50632868... 0.02 OrthoFinder output from all 47 species
Ceric.24G073300.1 ERF72, EBP,... transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Ceric.34G045400.1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre14.g620500 ESR1, DRN No description available 0.01 OrthoFinder output from all 47 species
Dac_g02023 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g26333 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05445 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.03 OrthoFinder output from all 47 species
Dcu_g14596 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01348 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Dde_g12401 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02414 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Ehy_g03378 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g11454 ERF-1, ATERF-1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22214 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g26298 ATERF3, ERF3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004798001 ERF-1, ATERF-1 No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01034563001 ERF110 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_08541 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_09495 RAP2.11 transcription factor (ERF). transcription factor (ERN1) 0.02 OrthoFinder output from all 47 species
LOC_Os03g22170.1 HRE2, LOC_Os03g22170 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49700.1 LOC_Os05g49700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g03670.1 DREB1A, ATCBF3,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g07030.1 RAP2.9, DEAR5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g09390.1 RAP2.12, LOC_Os06g09390 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
LOC_Os07g42510.1 RAP2.12, LOC_Os07g42510 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Len_g01166 RAP2.9, DEAR5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g01640 DEAR4, RAP2.10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14523 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g20664 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22025 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.06 OrthoFinder output from all 47 species
Len_g22270 ERF110 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g25467 RAP2.4 subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g41423 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Len_g54846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01837 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g03205 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06043 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28894 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_16778g0010 DREB2A, DREB2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_168025g0010 ERF110 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_484878g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Mp5g06970.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Msp_g04571 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04955 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Msp_g18978 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43138 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46208 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02156 No alias subgroup ERF-I transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g07909 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Nbi_g19264 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g03958 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g25668 RAP2.11 transcription factor *(ERN1) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g33487 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g13453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15405 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g41606 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55442 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Solyc03g093610.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g117130.3.1 Solyc03g117130 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g050750.2.1 Solyc04g050750 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc04g071770.3.1 ERF110, Solyc04g071770 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc11g006050.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc12g042210.2.1 Solyc12g042210 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Spa_g07893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17335 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g21487 RAP2.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24188 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00486 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e004048_P002 RAP2.12, Zm00001e004048 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e007351_P001 ERF-6-6, ERF6,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e009867_P001 RAP2.12, Zm00001e009867 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e015326_P001 Zm00001e015326 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Zm00001e015946_P001 ERF110, Zm00001e015946 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020274_P001 TMO3, CRF2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e022016_P001 Zm00001e022016 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e026989_P001 ERF110, Zm00001e026989 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e031783_P001 ERF110, Zm00001e031783 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Zm00001e033537_P001 ERF1, ATERF1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e034242_P001 RAP2.12, Zm00001e034242 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e036260_P001 RAP2.12, Zm00001e036260 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e036401_P001 DEAR3, Zm00001e036401 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 149 198
No external refs found!