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  5. Spa_g16486

Spa_g16486 (RAP2.11)


Aliases : RAP2.11

Description : transcription factor *(ERN1) & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16486
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00249140 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis... 0.05 OrthoFinder output from all 47 species
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00141890 CRF3,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00118070 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00148p00084540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G53910 RAP2.12 related to AP2 12 0.03 OrthoFinder output from all 47 species
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.02 OrthoFinder output from all 47 species
AT2G44940 No alias Integrase-type DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G11140 CRF1 cytokinin response factor 1 0.03 OrthoFinder output from all 47 species
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G05410 DREB2A, DREB2 DRE-binding protein 2A 0.02 OrthoFinder output from all 47 species
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G53290 CRF3 cytokinin response factor 3 0.02 OrthoFinder output from all 47 species
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g057545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g126732 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.06 OrthoFinder output from all 47 species
Aev_g16587 WIN1, SHN1 cutin and suberin biosynthesis transcription factor... 0.02 OrthoFinder output from all 47 species
Ala_g33839 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g37045 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Als_g38639 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g57703 CRF3 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05895 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05675.t1 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Aspi01Gene32060.t1 Aspi01Gene32060 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37405.t1 Aspi01Gene37405 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035884 No alias subgroup ERF-V transcription factor & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0168.g054644 TINY2 subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.10G005400.1 RAP2.12, Ceric.10G005400 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Cre14.g620500 ESR1, DRN No description available 0.02 OrthoFinder output from all 47 species
Dac_g09321 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Dac_g36611 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g17120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17848 DREB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27595 DEAR4, RAP2.10 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Ehy_g00460 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g22214 tny subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01002195001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
GSVIVT01013917001 ERF104 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01013923001 ERF104 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01013935001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01017315001 WIN1, SHN1 Cell wall.cutin and suberin.biosynthesis... 0.04 OrthoFinder output from all 47 species
GSVIVT01031747001 RRTF1 Alpha-amylase type B isozyme OS=Hordeum vulgare 0.02 OrthoFinder output from all 47 species
LOC_Os01g73770.1 CBF4, DREB1D,... transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g35240.1 LOC_Os02g35240 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
LOC_Os02g38090.1 ESR1, DRN, LOC_Os02g38090 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g45450.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1G... 0.03 OrthoFinder output from all 47 species
LOC_Os02g51670.1 RAP2.4, LOC_Os02g51670 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g52670.1 ERF110, LOC_Os02g52670 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g54050.1 LOC_Os02g54050 Ethylene-responsive transcription factor ERF018... 0.03 OrthoFinder output from all 47 species
LOC_Os03g41310.1 LOC_Os03g41310 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g46220.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os04g46240.1 ERF5, ATERF-5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os04g46250.1 ERF-6-6, ERF6,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49010.1 ERF2, ATERF2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08340.1 LOC_Os06g08340 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
LOC_Os06g10780.1 LOC_Os06g10780 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os06g40150.1 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os09g11460.1 HRE1, LOC_Os09g11460 Ethylene-responsive transcription factor ERF073... 0.03 OrthoFinder output from all 47 species
LOC_Os09g35020.1 CBF4, DREB1D,... Dehydration-responsive element-binding protein 1H... 0.03 OrthoFinder output from all 47 species
Len_g02180 No alias subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Lfl_g15284 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427743g0020 TMO3, CRF2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_134453g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_137148g0010 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_30120g0010 DRN-LIKE, ESR2,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
MA_3758g0010 No alias Ethylene-responsive transcription factor ERF013... 0.02 OrthoFinder output from all 47 species
MA_7960347g0010 TMO3, CRF2 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
MA_99821g0010 TMO3, CRF2 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Mp5g02590.1 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Mp5g11100.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Msp_g05560 No alias subgroup ERF-V transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22598 CRF3 subgroup ERF-VI transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g37745 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g38462 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ore_g07820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20460 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40725 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ore_g44017 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g09597 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08048 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Pnu_g21385 PUCHI subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g31928 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.05 OrthoFinder output from all 47 species
Sam_g15417 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g16459 No alias subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g077840.2.1 ATERF12, ERF12,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc02g090800.1.1 RAP2.6, Solyc02g090800 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc03g005510.2.1 Solyc03g005510 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc03g093540.1.1 Solyc03g093540 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Solyc03g093550.1.1 Solyc03g093550 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc03g093560.1.1 Solyc03g093560 transcription factor (ERF) 0.07 OrthoFinder output from all 47 species
Solyc03g117230.1.1 Solyc03g117230 Ethylene-responsive transcription factor ERF084... 0.02 OrthoFinder output from all 47 species
Solyc04g051360.3.1 ABR1, Solyc04g051360 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc04g054910.4.1 Solyc04g054910 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Solyc05g050830.3.1 Solyc05g050830 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc05g052040.1.1 Solyc05g052040 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
Solyc06g051840.1.1 CRF4, Solyc06g051840 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc06g082590.1.1 CRF4, Solyc06g082590 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g078170.1.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc08g078180.1.1 ERF2, ATERF2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g078190.2.1 ERF5, ATERF-5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc09g089910.1.1 Solyc09g089910 transcription factor (ERF). transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Spa_g21730 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e013685_P001 ATERF4, RAP2.5,... no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e014008_P002 WIN1, SHN1,... transcription factor (ERF). SHN-type cutin and suberin... 0.02 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e023759_P001 Zm00001e023759 Ethylene-responsive transcription factor ERF017... 0.02 OrthoFinder output from all 47 species
Zm00001e023804_P001 DREB26, Zm00001e023804 Ethylene-responsive transcription factor ERF013... 0.01 OrthoFinder output from all 47 species
Zm00001e023816_P001 Zm00001e023816 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026989_P001 ERF110, Zm00001e026989 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e031497_P001 ABI4, SAN5,... Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.01 OrthoFinder output from all 47 species
Zm00001e031783_P001 ERF110, Zm00001e031783 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e032032_P001 ATERF12, ERF12,... transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Zm00001e034661_P001 ERF110, Zm00001e034661 Ethylene-responsive transcription factor ERF115... 0.01 OrthoFinder output from all 47 species
Zm00001e035837_P001 ERF72, EBP,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e036260_P001 RAP2.12, Zm00001e036260 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 121 170
No external refs found!