Spa_g16409 (PUB26)

Aliases : PUB26

Description : U-Box-group-III E3 ubiquitin ligase & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g16409
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00030p00130440	CMPG2, ATCMPG2,...	Protein degradation.peptide tagging.Ubiquitin...	0.04	OrthoFinder output from all 47 species
AT3G52450	PUB22	plant U-box 22	0.02	OrthoFinder output from all 47 species
Aev_g18167	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g06990	PUB23	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g57047	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g15330	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g20185	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g04412	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g04774	PUB25	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12032.t1	PUB25, Aspi01Gene12032	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene18443.t1	PUB23, Aspi01Gene18443	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene19351.t1	Aspi01Gene19351	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene39077.t2	Aspi01Gene39077	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene43214.t1	PUB24, Aspi01Gene43214	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene60604.t1	PUB26, Aspi01Gene60604	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g29374	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g04484	PUB25	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g04516	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g04683	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g14166	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g26825	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g46168	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g01464	PUB26	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g03660	PUB23	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g11880	CMPG1, ATCMPG1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g16356	PUB22	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01011139001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01011140001	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01011616001	CMPG1, ATCMPG1	U-box domain-containing protein 20 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_02627	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_02628	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_02629	No alias	U-box domain-containing protein 26 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Gb_02635	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Gb_13090	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_16227	No alias	U-box domain-containing protein 21 OS=Arabidopsis...	0.07	OrthoFinder output from all 47 species
LOC_Os01g64570.1	PUB23, LOC_Os01g64570	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
LOC_Os02g34410.1	PUB25, LOC_Os02g34410	U-box domain-containing protein 25 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os04g34140.1	PUB29, ATPUB29,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
MA_83739g0020	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_84154g0010	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_8837995g0010	PUB26	U-box domain-containing protein 26 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Mp7g11000.1	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Mp7g11020.1	PUB25	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Msp_g12974	PUB25	E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g38744	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g08919	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g15868	PUB23	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g29544	PUB23	E3 ubiquitin ligase & original description: none	0.06	OrthoFinder output from all 47 species
Ore_g33878	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g33879	PUB26	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g36530	PUB23	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g42463	PUB23	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g12470	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12004	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g27483	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c22_7680V3.1	Pp3c22_7680	CYS, MET, PRO, and GLY protein 2	0.01	OrthoFinder output from all 47 species
Solyc01g007000.4.1	PUB22, Solyc01g007000	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007020.4.1	PUB23, Solyc01g007020	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007030.3.1	PUB22, Solyc01g007030	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007040.4.1	PUB22, Solyc01g007040	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc04g008100.3.1	Solyc04g008100	U-box domain-containing protein 21 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Solyc04g071030.1.1	Solyc04g071030	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
Solyc11g006030.1.1	Solyc11g006030	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Spa_g08841	PUB25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g57248	PUB29, ATPUB29	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g01830	PUB26	U-Box-group-III E3 ubiquiTin ligase & original description: none	0.07	OrthoFinder output from all 47 species
Zm00001e019173_P001	PUB23, Zm00001e019173	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	16	87

External Links

No external refs found!

Spa_g16409 (PUB26)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation