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  5. Spa_g16205

Spa_g16205 (ATFSD1, FSD1)


Aliases : ATFSD1, FSD1

Description : cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2) & original description: none


Gene families : OG0002805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16205
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Dde_g09919 ATFSD1, FSD1 cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2)... 0.02 OrthoFinder output from all 47 species
Dde_g51721 FSD2 iron superoxide dismutase *(FSD) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g08907 FSD2 iron superoxide dismutase *(FSD) & original description: none 0.01 OrthoFinder output from all 47 species
Smo115358 ATFSD1, FSD1 Redox homeostasis.enzymatic reactive oxygen species... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR019831 Mn/Fe_SOD_N 42 124
IPR019832 Mn/Fe_SOD_C 132 242
No external refs found!