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  5. Spa_g16192

Spa_g16192


Description : regulatory factor *(RIQ) of thylakoid grana stacking & original description: none


Gene families : OG0004779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16192
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT1G74730 No alias Protein of unknown function (DUF1118) 0.04 OrthoFinder output from all 47 species
Adi_g039949 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Aev_g00516 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.04 OrthoFinder output from all 47 species
Als_g18697 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Ceric.25G059600.1 Ceric.25G059600 regulatory factor *(RIQ) of thylakoid grana stacking &... 0.05 OrthoFinder output from all 47 species
Ehy_g17265 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
GSVIVT01008063001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g40310.1 LOC_Os01g40310 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Lfl_g05217 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Mp3g09060.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g04786 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Msp_g04787 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.06 OrthoFinder output from all 47 species
Pir_g20319 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Solyc03g113240.3.1 Solyc03g113240 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g04757 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.02 OrthoFinder output from all 47 species
Tin_g32284 No alias regulatory factor *(RIQ) of thylakoid grana stacking &... 0.03 OrthoFinder output from all 47 species
Zm00001e020546_P001 Zm00001e020546 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
InterPro domains Description Start Stop
IPR009500 DUF1118 92 205
No external refs found!