Zm00001d042582 (GRMZM2G080917)


Aliases : GRMZM2G080917

Description : 27.3.2 RNA.regulation of transcription.Alfin-like AL4 encodes a member of the Alfin-Like family of nuclear-localized PhD domain containing homeodomain proteins. Binds to H3K4 di or trimethylated DNA. alfin-like 4 (AL4)


Gene families : OG_01_0000165 (Gene family) Phylogenetic Tree(s): OG0000165_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d042582
Cluster HCCA cluster: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021357.26 No alias No description available 0.01 Gene family
GSVIVT01015122001 No alias 27.3.2 RNA.regulation of transcription.Alfin-like AL4... 0.03 Gene family
GSVIVT01023128001 No alias 27.3.2 RNA.regulation of transcription.Alfin-like AL6... 0.03 Gene family
LOC_Os11g14010 Os11g0244800 27.3.2 RNA.regulation of transcription.Alfin-like AL7... 0.02 Gene family
MA_35469g0010 No alias No description available 0.02 Gene family
Solyc01g102760.3.1 Solyc01g102760.3 27.3.2 RNA.regulation of transcription.Alfin-like AL7... 0.04 Gene family
Solyc05g032770.3.1 Solyc05g032770.3 27.3.2 RNA.regulation of transcription.Alfin-like AL5... 0.03 Gene family
Solyc12g096040.2.1 Solyc12g096040.2 27.3.2 RNA.regulation of transcription.Alfin-like AL4... 0.04 Gene family
Zm00001d010834 GRMZM2G017142 27.3.2 RNA.regulation of transcription.Alfin-like AL1... 0.02 Gene family
Zm00001d037537 GRMZM2G148810 27.3.2 RNA.regulation of transcription.Alfin-like AL2... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0042393 histone binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 204 253
IPR021998 Alfin 15 142
No external refs found!