1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g16137

Spa_g16137 (PBB1)


Aliases : PBB1

Description : beta-type-2 component *(PBB) of 26S proteasome & original description: none


Gene families : OG0004022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004022_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16137

Target Alias Description ECC score Gene Family Method Actions
AT3G27430 PBB1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.04 OrthoFinder output from all 47 species
Aop_g04145 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000485 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Cre10.g424400 PBB1 Protein degradation.26S proteasome.20S core... 0.08 OrthoFinder output from all 47 species
Dac_g04547 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Dde_g05731 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Gb_35125 PBB2 component beta type-2 of 26S proteasome 0.07 OrthoFinder output from all 47 species
LOC_Os05g09490.1 PBB1, LOC_Os05g09490 component beta type-2 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Len_g01148 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Lfl_g00695 PBB1 beta-type-2 component *(PBB) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
MA_10436996g0010 PBB2 component beta type-2 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Mp1g03530.1 PBB2 component beta type-2 of 26S proteasome 0.09 OrthoFinder output from all 47 species
Msp_g07522 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Nbi_g02753 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Ppi_g08876 PBB2 beta-type-2 component *(PBB) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo149251 PBB1 Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Solyc05g013820.4.1 PBB1, Solyc05g013820 component beta type-2 of 26S proteasome 0.1 OrthoFinder output from all 47 species
Zm00001e029814_P002 PBB1, Zm00001e029814 component beta type-2 of 26S proteasome 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004017 adenylate kinase activity IEP HCCA
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0050145 nucleoside monophosphate kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 34 214
No external refs found!