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  5. Spa_g16107

Spa_g16107


Description : not classified & original description: none


Gene families : OG0003361 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003361_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16107

Target Alias Description ECC score Gene Family Method Actions
Aop_g04295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g03283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0200.g025604 No alias not classified & original description: CDS=197-1804 0.03 OrthoFinder output from all 47 species
Tin_g03336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e028223_P001 Zm00001e028223 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!