Spa_g15917


Description : not classified & original description: none


Gene families : OG0002523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002523_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g15917

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00138080 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.03 OrthoFinder output from all 47 species
Adi_g000341 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g032639 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g13973 EMB139, EMB506 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07232 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05906.t1 Aspi01Gene05906 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene06535.t1 Aspi01Gene06535 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06535.t2 Aspi01Gene06535 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g043044 No alias not classified & original description: CDS=221-829 0.02 OrthoFinder output from all 47 species
Azfi_s0118.g046603 No alias not classified & original description: CDS=1-246 0.02 OrthoFinder output from all 47 species
Azfi_s0212.g058202 No alias not classified & original description: CDS=359-1396 0.01 OrthoFinder output from all 47 species
Azfi_s0371.g067116 EMB16, EMB2036, AKRP not classified & original description: CDS=69-1934 0.01 OrthoFinder output from all 47 species
Cba_g04473 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g10009 EMB139, EMB506 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G110600.1 Ceric.02G110600 not classified & original description: pacid=50584977... 0.01 OrthoFinder output from all 47 species
Ceric.14G014700.1 Ceric.14G014700 not classified & original description: pacid=50633928... 0.03 OrthoFinder output from all 47 species
Dac_g10355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36507 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g10933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24387 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01005198001 EMB16, EMB2036, AKRP Ankyrin repeat domain-containing protein, chloroplastic... 0.05 OrthoFinder output from all 47 species
LOC_Os03g04300.3 EMB16, EMB2036,... Ankyrin repeat domain-containing protein, chloroplastic... 0.01 OrthoFinder output from all 47 species
Len_g20404 EMB139, EMB506 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g50367 EMB16, EMB2036, AKRP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59009 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g11402 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g14600.1 No alias Ankyrin repeat domain-containing protein, chloroplastic... 0.02 OrthoFinder output from all 47 species
Nbi_g00869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06115 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38840 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g04583 EMB139, EMB506 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16350 EMB139, EMB506 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010764 No alias not classified & original description: CDS=422-1504 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011451 No alias not classified & original description: CDS=16-1155 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012861 No alias not classified & original description: CDS=270-1178 0.01 OrthoFinder output from all 47 species
Sam_g18486 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g52287 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g47848 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29609 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g32282 EMB139, EMB506 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g37517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 189 279
No external refs found!