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  5. Spa_g15735

Spa_g15735


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0001347 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001347_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g15735

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene28908.t1 ZFWD1, Aspi01Gene28908 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ceric.26G064400.1 Ceric.26G064400 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
LOC_Os02g45480.1 ZFWD1, LOC_Os02g45480 C3H zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Pir_g01969 ZFWD1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 343 378
IPR001680 WD40_repeat 304 339
IPR001680 WD40_repeat 184 218
IPR000571 Znf_CCCH 152 174
No external refs found!