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  5. Spa_g15408

Spa_g15408 (AUD1, UXS2, ATUXS2)


Aliases : AUD1, UXS2, ATUXS2

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g15408
Cluster HCCA: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
AT3G53520 UXS1, ATUXS1 UDP-glucuronic acid decarboxylase 1 0.03 OrthoFinder output from all 47 species
Aev_g02095 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02174 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48385 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42489 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00824 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03666 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Gb_33566 UXS5 UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species
LOC_Os01g21320.1 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.03 OrthoFinder output from all 47 species
LOC_Os05g29990.1 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.02 OrthoFinder output from all 47 species
Msp_g06332 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27692 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000237 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: CDS=1-1446 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006940 UXS6 EC_4.1 carbon-carbon lyase & original description: CDS=142-1230 0.04 OrthoFinder output from all 47 species
Smo267587 AUD1, UXS2, ATUXS2 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Smo438351 UXS5 Carbohydrate metabolism.nucleotide sugar... 0.04 OrthoFinder output from all 47 species
Solyc04g011400.3.1 UXS5, Solyc04g011400 UDP-D-glucuronic acid decarboxylase 0.02 OrthoFinder output from all 47 species
Solyc09g005810.4.1 UXS1, ATUXS1,... UDP-D-glucuronic acid decarboxylase 0.03 OrthoFinder output from all 47 species
Solyc11g066150.3.1 UXS5, Solyc11g066150 UDP-D-glucuronic acid decarboxylase 0.02 OrthoFinder output from all 47 species
Zm00001e001241_P001 UXS5, Zm00001e001241 UDP-D-glucuronic acid decarboxylase 0.05 OrthoFinder output from all 47 species
Zm00001e038475_P001 UXS6, Zm00001e038475 UDP-D-glucuronic acid decarboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 127 422
No external refs found!