Zm00001d042473 (GRMZM2G419328)


Aliases : GRMZM2G419328

Description : 34.13 transport.peptides and oligopeptides Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. GFP-tagged PTR1 localizes to the plasma membrane and has 8 to 11 predicted transmembrane domains. PTR1 is expressed in a number of different vascular tissues throughout the plant based on promoter:GUS expression analysis. ptr1 mutants have a lower dry weight than wild type plants when both are grown with Pro-Ala or Ala-Ala dipeptides as their nitrogen source, suggesting that PTR1 plays a role in dipeptide uptake in the roots. Furthermore N content of ptr1 mutants is lower than that of wild type plants when grown with Pro-Ala or a mixture of dipeptides as nitrogen source peptide transporter 1 (PTR1)


Gene families : OG_01_0000015 (Gene family) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d042473
Cluster HCCA cluster: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT1G22570 No alias Major facilitator superfamily protein 0.03 Gene family
AT1G72130 No alias Major facilitator superfamily protein 0.03 Gene family
GSVIVT01001292001 No alias 34.4 transport.nitrate Encodes NRT1.1 (CHL1), a... 0.04 Gene family
GSVIVT01018395001 No alias 34.13 transport.peptides and oligopeptides Transmembrane... 0.02 Gene family
GSVIVT01024796001 No alias 34.13 transport.peptides and oligopeptides Encodes a di-... 0.04 Gene family
GSVIVT01025359001 No alias 34.13 transport.peptides and oligopeptides Major... 0.03 Gene family
GSVIVT01025795001 No alias 34.13 transport.peptides and oligopeptides Major... 0.03 Gene family
GSVIVT01026058001 No alias 34.13 transport.peptides and oligopeptides Major... 0.03 Gene family
GSVIVT01028392001 No alias 34.13 transport.peptides and oligopeptides Encodes a di-... 0.02 Gene family
LOC_Os01g04950 Os01g0142600,... 34.13 transport.peptides and oligopeptides Encodes a... 0.02 Gene family
LOC_Os01g65200 Os01g0872500 34.13 transport.peptides and oligopeptides Major... 0.02 Gene family
LOC_Os03g04570 Os03g0138700 34.13 transport.peptides and oligopeptides Encodes a di-... 0.01 Gene family
LOC_Os03g51050 Os03g0719900 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.02 Gene family
LOC_Os04g50950 Os04g0597800 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.02 Gene family
LOC_Os05g27010 Os05g0335800 34.13 transport.peptides and oligopeptides Major... 0.05 Gene family
LOC_Os05g35650 Os05g0431700 34.13 transport.peptides and oligopeptides Major... 0.05 Gene family
LOC_Os06g49220 Os06g0705700 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.02 Gene family
LOC_Os06g49250 Os06g0706400,... 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.05 Gene family
LOC_Os08g05910 Os08g0155400 34.4 transport.nitrate Encodes NRT1.1 (CHL1), a... 0.02 Gene family
LOC_Os10g02240 Os10g0111300 34.3 transport.amino acids Encodes a di- and tri-peptide... 0.05 Gene family
LOC_Os10g33170 Os10g0469900 34.13 transport.peptides and oligopeptides Encodes a di-... 0.03 Gene family
Smo103849 PACid_15412135 34.13 transport.peptides and oligopeptides Encodes a... 0.02 Gene family
Smo84173 PACid_15414917 No description available 0.03 Gene family
Smo94418 PACid_15401870 34.13 transport.peptides and oligopeptides Encodes a... 0.01 Gene family
Solyc07g008520.3.1 Solyc07g008520.3 34.13 transport.peptides and oligopeptides Encodes a di-... 0.02 Gene family
Solyc08g007060.3.1 Solyc08g007060.3 34.13 transport.peptides and oligopeptides Transmembrane... 0.02 Gene family
Solyc08g007430.2.1 Solyc08g007430.2 34.4 transport.nitrate Encodes NRT1.1 (CHL1), a... 0.04 Gene family
Solyc12g089230.2.1 Solyc12g089230.2 34.13 transport.peptides and oligopeptides Encodes a... 0.03 Gene family
Zm00001d027285 GRMZM2G161483 34.4 transport.nitrate Encodes NRT1.1 (CHL1), a... 0.03 Gene family
Zm00001d034674 GRMZM2G055834 34.13 transport.peptides and oligopeptides Major... 0.03 Gene family

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan
MF GO:0022857 transmembrane transporter activity IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000109 POT_fam 130 549
No external refs found!