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  5. Spa_g15174

Spa_g15174


Description : not classified & original description: none


Gene families : OG0005880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005880_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g15174
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Adi_g104494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G030000.1 Ceric.28G030000 not classified & original description: pacid=50570416... 0.05 OrthoFinder output from all 47 species
Ehy_g07881 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012163001 No alias Polyadenylate-binding protein 2 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
LOC_Os04g52200.1 LOC_Os04g52200 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g12180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g17720.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g43027 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g081940.3.1 Solyc02g081940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e041627_P001 Zm00001e041627 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e042214_P001 Zm00001e042214 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 545 604
IPR000504 RRM_dom 669 749
IPR000504 RRM_dom 349 419
IPR000504 RRM_dom 775 843
IPR000504 RRM_dom 5 71
No external refs found!