Spa_g15123


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g15123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267110 OSB1,... Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00090700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g13880... 0.02 OrthoFinder output from all 47 species
Adi_g004271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035515 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13233 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14769 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g19167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21679 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g36508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18251 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07409 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g01397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02232 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08252 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11268 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16327 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16814 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18162 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18367 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20359 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20814 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g20887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23677 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28230 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30802 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g60598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67888 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67891 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34532.t1 Aspi01Gene34532 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40497.t1 CRR2, Aspi01Gene40497 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05286 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07718 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67900 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.13G062400.1 Ceric.13G062400 not classified & original description: pacid=50636814... 0.06 OrthoFinder output from all 47 species
Ceric.14G074100.1 Ceric.14G074100 not classified & original description: pacid=50633188... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g02910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18764 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07839 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g03365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03377 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g04001 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16907 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18127 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23809 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24358 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g25070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g41263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g49997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50888 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g52009 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013023001 No alias Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
GSVIVT01017996001 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Gb_12832 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.08 OrthoFinder output from all 47 species
LOC_Os06g47920.1 LOC_Os06g47920 Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
Len_g03683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03912 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g03913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04309 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g05381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12521 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17363 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18251 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18417 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18565 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18835 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Len_g18996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19000 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g19027 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Len_g20618 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21362 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23812 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g25708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27027 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g30737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33522 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g40128 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g44147 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44806 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g49921 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g54678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54961 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55702 OTP86 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Lfl_g07019 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12945 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g32907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08826 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41356 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05898 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g06277 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11803 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15684 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21727 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27842 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29922 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39731 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40050 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03012 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g11835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12221 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13050 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13229 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g20470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57955 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63839 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04226 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30301 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03900 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07362 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14464 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g33764 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g39244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57858 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g62708 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017968 No alias not classified & original description: CDS=1-2673 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019261 No alias not classified & original description: CDS=1-3048 0.05 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.05 OrthoFinder output from all 47 species
Spa_g06334 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g27799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g44799 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g45537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g23277 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 122 170
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 325 373
IPR002885 Pentatricopeptide_repeat 198 221
IPR002885 Pentatricopeptide_repeat 227 256
IPR002885 Pentatricopeptide_repeat 400 424
IPR002885 Pentatricopeptide_repeat 300 320
No external refs found!