Zm00001d042432 (GRMZM5G814985)


Aliases : GRMZM5G814985

Description : No description available


Gene families : OG_01_0000130 (Gene family) Phylogenetic Tree(s): OG0000130_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d042432
Cluster HCCA cluster: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT1G01040 DCL1, CAF,... dicer-like 1 0.04 Gene family
AT3G03300 ATDCL2, DCL2 dicer-like 2 0.09 Gene family
AT5G20320 DCL4, ATDCL4 dicer-like 4 0.06 Gene family
GSVIVT01001045001 No alias 27.1.20 RNA.processing.degradation dicer Encodes an... 0.04 Gene family
GSVIVT01027462001 No alias 27.1.20 RNA.processing.degradation dicer Encodes a Dicer... 0.02 Gene family
GSVIVT01035494001 No alias No description available 0.02 Gene family
LOC_Os01g68120 Os01g0909200 No description available 0.05 Gene family
LOC_Os04g43050 Os04g0509300 27.1.20 RNA.processing.degradation dicer Encodes an... 0.02 Gene family
LOC_Os10g34430 Os10g0485600 27.1.20 RNA.processing.degradation dicer Encodes a... 0.07 Gene family
MA_10437243g0010 No alias 27.1.20 RNA.processing.degradation dicer Encodes a Dicer... 0.03 Gene family
Smo444049 PACid_15413649 27.1.20 RNA.processing.degradation dicer Encodes an... 0.02 Gene family
Smo448444 PACid_15405962 27.1.20 RNA.processing.degradation dicer Encodes a... 0.02 Gene family
Smo74321 PACid_15409014 27.1.20 RNA.processing.degradation dicer Encodes an... 0.04 Gene family
Smo86110 PACid_15420555 27.1.20 RNA.processing.degradation dicer Encodes a Dicer... 0.02 Gene family
Solyc07g005030.3.1 Solyc07g005030.3 27.1.20 RNA.processing.degradation dicer Encodes an... 0.04 Gene family
Solyc08g067210.3.1 Solyc08g067210.3 No description available 0.12 Gene family
Solyc10g005130.3.1 Solyc10g005130.3 27.1.20 RNA.processing.degradation dicer Encodes a Dicer... 0.04 Gene family
Zm00001d025830 GRMZM2G024466,... 27.1.20 RNA.processing.degradation dicer Encodes an... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000999 RNase_III_dom 842 913
IPR000999 RNase_III_dom 631 765
IPR001650 Helicase_C 25 82
IPR005034 Dicer_dimerisation_dom 153 239
IPR003100 PAZ_dom 463 591
No external refs found!