Spa_g14928

Description : RsmD-type rRNA methyltransferase & original description: none

Gene families : OG0005430 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005430_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g14928

Target	Alias	Description	ECC score	Gene Family Method
Ala_g13790	No alias	RsmD-type rRNA methyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.26G002400.1	Ceric.26G002400	RsmD-type rRNA methyltransferase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g29170	No alias	RsmD-type rRNA methyltransferase & original description: none	0.05	OrthoFinder output from all 47 species
LOC_Os03g52640.2	LOC_Os03g52640	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e012081_P002	Zm00001e012081	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!