1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g14908

Spa_g14908


Description : regulatory protein *(TVA) of cellulose synthase complex trafficking & original description: none


Gene families : OG0001095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001095_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g14908

Target Alias Description ECC score Gene Family Method Actions
AT4G27435 No alias Protein of unknown function (DUF1218) 0.06 OrthoFinder output from all 47 species
Aev_g05174 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Aev_g09647 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Ala_g35334 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.05 OrthoFinder output from all 47 species
Als_g39920 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.07 OrthoFinder output from all 47 species
Aop_g02732 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Aop_g06312 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
Aspi01Gene55438.t1 Aspi01Gene55438 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12975 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Dcu_g07354 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.05 OrthoFinder output from all 47 species
Dde_g29571 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.07 OrthoFinder output from all 47 species
Ehy_g07501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g08174 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.06 OrthoFinder output from all 47 species
GSVIVT01014391001 No alias No description available 0.07 OrthoFinder output from all 47 species
Gb_10694 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g27810.1 LOC_Os07g27810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g16130.1 LOC_Os08g16130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os09g10910.3 LOC_Os09g10910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g06383 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
MA_10429894g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g00223 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
Nbi_g00447 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.1 OrthoFinder output from all 47 species
Pir_g00326 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.04 OrthoFinder output from all 47 species
Pir_g08907 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.07 OrthoFinder output from all 47 species
Pnu_g01123 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.08 OrthoFinder output from all 47 species
Ppi_g04262 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g009330.3.1 Solyc05g009330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g53993 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Tin_g31299 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Zm00001e009524_P001 Zm00001e009524 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006760 folic acid-containing compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009396 folic acid-containing compound biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009606 DEAL/Modifying_wall_lignin1/2 59 154
No external refs found!