Spa_g14905 (TRP2, TSB1, ATTSB1, TRPB)


Aliases : TRP2, TSB1, ATTSB1, TRPB

Description : EC_4.2 carbon-oxygen lyase & original description: none


Gene families : OG0002978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002978_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g14905
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Cre03.g161400 TRP2, TSB1, ATTSB1, TRPB Amino acid metabolism.biosynthesis.shikimate... 0.02 OrthoFinder output from all 47 species
Msp_g42922 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09773 TRP2, TSB1, ATTSB1, TRPB EC_4.2 carbon-oxygen lyase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g018390.3.1 Solyc10g018390 Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001926 TrpB-like_PALP 115 445
No external refs found!