Aev_g20439 (ATHB13)

Aliases : ATHB13

Description : HD-ZIP I/II-type transcription factor & original description: none

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g20439

Target	Alias	Description	ECC score	Gene Family Method
Als_g09449	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g25616	ATHB40, HB40, HB-5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.03G096000.1	ATHB5, ATHB-5,...	HD-ZIP I/II-type transcription factor & original...	0.06	OrthoFinder output from all 47 species
Dac_g34453	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01020078001	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.04	OrthoFinder output from all 47 species
Gb_00961	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Gb_07295	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Gb_35116	AtHB23, HB23	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Msp_g01067	ATHB16, HB16, ATHB-16	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Nbi_g33622	ATHB16, HB16, ATHB-16	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Pnu_g15485	ATHB13	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004723	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Spa_g03033	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Zm00001e012829_P001	ATHB13, Zm00001e012829	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Zm00001e034785_P001	HB-12, ATHB-12,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	228	281
IPR003106	Leu_zip_homeo	283	324

External Links

No external refs found!

Aev_g20439 (ATHB13)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation