Spa_g14658

Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none

Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g14658

Target	Alias	Description	ECC score	Gene Family Method
Als_g03741	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g13383	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g14287	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g03060	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.14G002100.1	Ceric.14G002100	not classified & original description: pacid=50633322...	0.04	OrthoFinder output from all 47 species
GSVIVT01009934001	CIP8	E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Msp_g43938	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
Nbi_g02165	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g03872	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g17099	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g03899	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e028905_P001	RHC1A, Zm00001e028905	Probable E3 ubiquitin-protein ligase RHC1A...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	280	322
IPR039525	RNF126-like_zinc-ribbon	96	127

External Links

No external refs found!