Spa_g14610


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g14610
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00174700 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Adi_g024957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05672 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56368 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59589 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40546 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04129 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04252 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16327 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17248 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g18367 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18707 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20132 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20359 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26859 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28230 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28684 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g37757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67886 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68117 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G074100.1 Ceric.14G074100 not classified & original description: pacid=50633188... 0.04 OrthoFinder output from all 47 species
Ceric.27G011400.1 Ceric.27G011400 not classified & original description: pacid=50605728... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.01 OrthoFinder output from all 47 species
Dac_g07774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g17043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21351 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42424 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12890 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18082 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012201001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01031251001 LPA66 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
LOC_Os04g02850.1 OTP84, LOC_Os04g02850 RNA editing factor (OTP84) 0.03 OrthoFinder output from all 47 species
LOC_Os05g12130.1 EMB2261, LOC_Os05g12130 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species
LOC_Os05g49920.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.03 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g28860 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55702 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06642 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07038 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07380 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g07656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07787 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08420 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08720 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32453 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33323 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06257 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08298 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18652 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57720 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04713 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07362 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14303 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009070 No alias not classified & original description: CDS=1-2223 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019270 No alias not classified & original description: CDS=1-1617 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021932 No alias not classified & original description: CDS=1-3567 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0206.g025782 No alias not classified & original description: CDS=1-2394 0.03 OrthoFinder output from all 47 species
Sam_g14049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo173093 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Solyc01g098150.3.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.02 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 47 species
Solyc08g076150.4.1 Solyc08g076150 Pentatricopeptide repeat-containing protein At1g31920... 0.03 OrthoFinder output from all 47 species
Tin_g17148 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023289_P001 Zm00001e023289 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 253 273
IPR002885 Pentatricopeptide_repeat 485 510
IPR002885 Pentatricopeptide_repeat 457 480
IPR002885 Pentatricopeptide_repeat 279 325
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 177 223
IPR002885 Pentatricopeptide_repeat 380 427
No external refs found!