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  5. Spa_g14176

Spa_g14176


Description : not classified & original description: none


Gene families : OG0032022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0032022_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g14176
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Dac_g32033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21850 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 525 571
IPR002885 Pentatricopeptide_repeat 223 268
IPR002885 Pentatricopeptide_repeat 24 50
IPR002885 Pentatricopeptide_repeat 123 147
IPR002885 Pentatricopeptide_repeat 297 317
IPR002885 Pentatricopeptide_repeat 325 355
IPR002885 Pentatricopeptide_repeat 426 455
No external refs found!