Spa_g14009


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g14009

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00195340 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
AT2G01510 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G16610 No alias pentatricopeptide (PPR) repeat-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g002304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g020545 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g025491 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g068895 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g069156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g099216 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09730 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g17904 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g22656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12663 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g17035 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24747 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g30861 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g31006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36547 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g06025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27542 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g29475 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03430 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03649 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g03761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04118 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09092 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g14000 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16811 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23956 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g31824 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33300 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g35556 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36072 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g43404 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g61281 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67888 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68048 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68065 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45825.t1 Aspi01Gene45825 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61522.t1 OTP84, Aspi01Gene61522 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0544.g076391 No alias not classified & original description: CDS=1-906 0.08 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.06 OrthoFinder output from all 47 species
Azfi_s1775.g106729 No alias not classified & original description: CDS=1-2331 0.06 OrthoFinder output from all 47 species
Cba_g10692 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20531 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g45877 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g56830 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58808 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75925 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.06 OrthoFinder output from all 47 species
Dac_g05005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32204 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35986 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g45110 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g45756 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05220 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22351 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015461001 ABCG40, PDR12,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Gb_17428 No alias Pentatricopeptide repeat-containing protein At4g04370... 0.05 OrthoFinder output from all 47 species
LOC_Os01g15530.1 LOC_Os01g15530 Pentatricopeptide repeat-containing protein At5g56310... 0.03 OrthoFinder output from all 47 species
LOC_Os04g02850.1 OTP84, LOC_Os04g02850 RNA editing factor (OTP84) 0.03 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.04 OrthoFinder output from all 47 species
Len_g28084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43654 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g05012 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07406 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g07688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20496 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g35606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35801 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g04475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05129 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g12368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g17712 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g19554 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g20115 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g21424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22924 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28474 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28511 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28787 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33976 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42421 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g43763 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46059 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04998 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g04999 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g05484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07543 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g10358 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18381 OTP84 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g20499 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21177 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g10306 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13010 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g14318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15141 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g35144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57069 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g57349 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57540 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g57973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30620 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06887 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g29710 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53727 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53968 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56659 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g58117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59214 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001920 OTP86 not classified & original description: CDS=1-2427 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019387 REME1 not classified & original description: CDS=1-1161 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0262.g026911 REME1 not classified & original description: CDS=1-1512 0.05 OrthoFinder output from all 47 species
Sam_g08388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g13972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g16791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g37902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo34785 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Smo77659 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Spa_g07289 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14323 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14979 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15000 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27883 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g27905 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g28071 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33278 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45608 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47250 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g54465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55588 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56307 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44704 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g46234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 306 330
IPR002885 Pentatricopeptide_repeat 127 174
IPR002885 Pentatricopeptide_repeat 332 378
IPR002885 Pentatricopeptide_repeat 230 276
No external refs found!