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  5. Spa_g13989

Spa_g13989


Description : histone *(H2B) & original description: none


Gene families : OG0000176 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g13989

Target Alias Description ECC score Gene Family Method Actions
AT1G07790 HTB1 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G45980 HTB9, H2B Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G22880 HTB2, H2B histone B2 0.02 OrthoFinder output from all 47 species
Adi_g021198 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068717 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05666 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24593 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27849 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36120 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27152 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38176 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27522.t1 HTB4, Aspi01Gene27522 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G085900.1 HTB4, Ceric.29G085900 histone *(H2B) & original description: pacid=50624351... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000944.18 No alias Chromatin organisation.histones.H2B-type histone 0.01 OrthoFinder output from all 47 species
Dac_g31881 HTB4 histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44717 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08878 HTB4 histone *(H2B) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g20461 HTB4 histone *(H2B) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01025023001 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from all 47 species
LOC_Os08g38300.1 HTB11, LOC_Os08g38300 histone (H2B) 0.03 OrthoFinder output from all 47 species
Len_g06996 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38387 HTB4 histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g35793 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42769 No alias histone *(H2B) & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_15750V3.1 HTB4, Pp3c17_15750 Histone superfamily protein 0.02 OrthoFinder output from all 47 species
Solyc05g055440.1.1 HTB11, Solyc05g055440 histone (H2B) 0.04 OrthoFinder output from all 47 species
Solyc11g007920.1.1 HTB11, Solyc11g007920 histone (H2B) 0.03 OrthoFinder output from all 47 species
Spa_g45813 HTB4 histone *(H2B) & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g52508 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05754 No alias histone *(H2B) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 14 124
No external refs found!