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  5. Aev_g20316

Aev_g20316 (SPA4)


Aliases : SPA4

Description : regulatory component *(SPA) of COP1-SPA light signal transduction E3 ubiquitin ligase complex & original description: none


Gene families : OG0000638 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000638_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g20316
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Ala_g09701 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Als_g24085 SPA3 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008529 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Ceric.22G021600.1 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Cre02.g085050 FUS1, EMB168,... E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dac_g03389 FUS1, EMB168,... component *(COP1) of COP1-SPA light signal transduction... 0.02 OrthoFinder output from all 47 species
Dac_g20526 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.05 OrthoFinder output from all 47 species
Ehy_g13155 SPA2 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
GSVIVT01007271001 FUS1, EMB168,... External stimuli response.light.red/far red... 0.02 OrthoFinder output from all 47 species
Gb_40887 SPA3 protein kinase (PEK). regulator component SPA of... 0.03 OrthoFinder output from all 47 species
LOC_Os02g53140.1 FUS1, EMB168,... protein kinase (PEK). component COP1 of COP1-SPA E3... 0.04 OrthoFinder output from all 47 species
Lfl_g12926 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Nbi_g06333 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Ore_g10809 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.04 OrthoFinder output from all 47 species
Pnu_g07513 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.02 OrthoFinder output from all 47 species
Tin_g09992 SPA4 regulatory component *(SPA) of COP1-SPA light signal... 0.03 OrthoFinder output from all 47 species
Zm00001e019928_P005 SPA4, Zm00001e019928 protein kinase (PEK). regulator component SPA of... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008199 ferric iron binding IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 890 926
IPR001680 WD40_repeat 804 842
No external refs found!