Zm00001d042180 (GRMZM2G053273, GRMZM2G703260)


Aliases : GRMZM2G053273, GRMZM2G703260

Description : 31.4 cell.vesicle transport Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER. vamp/synaptobrevin-associated protein 27-2 (VAP27-2)


Gene families : OG_01_0000326 (Gene family) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d042180
Cluster HCCA cluster: Cluster_325

Target Alias Description ECC score Gene Family Method Actions
AT1G08820 VAP27-2 vamp/synaptobrevin-associated protein 27-2 0.03 Gene family
GSVIVT01001317001 No alias 28.99 DNA.unspecified Encodes VAP27 (for... 0.02 Gene family
LOC_Os01g71050 Os01g0936800 31.4 cell.vesicle transport Encodes VAP33-like protein... 0.02 Gene family
Zm00001d017448 GRMZM2G171406 No description available 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000535 MSP_dom 6 107
No external refs found!