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  5. Spa_g13176

Spa_g13176 (DRB1, HYL1)


Aliases : DRB1, HYL1

Description : not classified & original description: none


Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g13176

Target Alias Description ECC score Gene Family Method Actions
AT3G62800 DRB4 double-stranded-RNA-binding protein 4 0.03 OrthoFinder output from all 47 species
Cba_g26876 DRB1, HYL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35150 DRB1, HYL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21003 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g03778 DRB2 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Ehy_g01059 DRB5 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ehy_g28214 DRB1, HYL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030843001 No alias Double-stranded RNA-binding protein 4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_463g0010 No alias component HYL1 of DCL1-HYL1 miRNA biogenesis complex 0.12 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006925 DRB1, HYL1 not classified & original description: CDS=11-886 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015395 DRB3 regulatory protein *(DRB2) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Smo421581 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g118950.3.1 Solyc03g118950 Double-stranded RNA-binding protein 4 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Zm00001e010132_P001 DRB3, Zm00001e010132 Double-stranded RNA-binding protein 5 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 89 150
IPR014720 dsRBD_dom 3 65
No external refs found!