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  5. Spa_g13128

Spa_g13128


Description : histone demethylase *(JMJD6) & original description: none


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g13128

Target Alias Description ECC score Gene Family Method Actions
AT5G06550 No alias CONTAINS InterPro DOMAIN/s: Transcription factor... 0.03 OrthoFinder output from all 47 species
Ceric.32G009400.1 Ceric.32G009400 histone demethylase *(JMJD6) & original description:... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 95 135
IPR041667 Cupin_8 207 426
No external refs found!